Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase crec | SAMN05444679_10954 | Not Available | Positive | 2749463 - 2750899 | 52981.9 |
| penicillin-binding protein 1a | SAMN05444679_10955 | Not Available | Negative | 2750904 - 2753246 | 84978.7 |
| inner membrane protein | SAMN05444679_10956 | Not Available | Negative | 2753243 - 2754646 | 50209.4 |
| ca-activated chloride channel family protein | SAMN05444679_10957 | Not Available | Positive | 2754842 - 2756914 | 75577.5 |
| exosortase/archaeosortase family protein | SAMN05444679_10958 | Not Available | Positive | 2756925 - 2757860 | 32540.7 |
| hypothetical protein | SAMN05444679_10959 | Not Available | Positive | 2757838 - 2758413 | 21406.8 |
| transglycosylase | SAMN05444679_10960 | Not Available | Positive | 2758424 - 2759695 | 45986.4 |
| mobile mystery protein b | SAMN05444679_10961 | Not Available | Negative | 2759714 - 2760283 | 21276.2 |
| hypothetical protein | SAMN05444679_10962 | Not Available | Negative | 2760280 - 2760561 | 10322.5 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444679_10963 | Not Available | Positive | 2760725 - 2761834 | 39073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
