Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_10944 | Not Available | Negative | 2740819 - 2741004 | 5988.86 |
| glutathione s-transferase | SAMN05444679_10945 | Not Available | Positive | 2741191 - 2741799 | 22635.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_10946 | Not Available | Negative | 2741792 - 2743015 | 41969.9 |
| n-ethylmaleimide reductase | SAMN05444679_10947 | Not Available | Positive | 2743131 - 2744234 | 39274.4 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05444679_10948 | Not Available | Negative | 2744216 - 2745619 | 49999.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444679_10949 | Not Available | Negative | 2745616 - 2746305 | 24907.0 |
| copper chaperone | SAMN05444679_10950 | Not Available | Positive | 2746447 - 2746641 | 6879.09 |
| putative methyltransferase, lic12133 family | SAMN05444679_10951 | Not Available | Positive | 2746757 - 2747524 | 28597.8 |
| uncharacterized conserved protein, duf697 family | SAMN05444679_10952 | Not Available | Negative | 2747606 - 2748541 | 33043.1 |
| two-component system, ompr family, catabolic regulation response regulator creb | SAMN05444679_10953 | Not Available | Positive | 2748619 - 2749371 | 27762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
