Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein minc | SAMN05444679_10924 | Not Available | Positive | 2725564 - 2726319 | 25890.1 |
| septum site-determining protein mind | SAMN05444679_10925 | Not Available | Positive | 2726368 - 2727183 | 29249.3 |
| cell division topological specificity factor mine | SAMN05444679_10926 | Not Available | Positive | 2727187 - 2727471 | 10456.8 |
| serine aminopeptidase, s33 | SAMN05444679_10927 | Not Available | Negative | 2727487 - 2728392 | 32118.0 |
| hypothetical protein | SAMN05444679_10928 | Not Available | Negative | 2728395 - 2728508 | 4198.2 |
| transcriptional regulator, tetr family | SAMN05444679_10929 | Not Available | Negative | 2728583 - 2729185 | 22228.9 |
| phasin family protein | SAMN05444679_10930 | Not Available | Positive | 2729286 - 2729777 | 17522.0 |
| hypothetical protein | SAMN05444679_10931 | Not Available | Positive | 2729884 - 2730132 | 8940.54 |
| regulator rcnb of ni and co efflux | SAMN05444679_10932 | Not Available | Negative | 2730137 - 2730541 | 15420.2 |
| hypothetical protein | SAMN05444679_10933 | Not Available | Negative | 2730638 - 2730991 | 11791.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
