Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN05444679_10914 | Not Available | Positive | 2714734 - 2715054 | 12043.7 |
| threonine dehydratase | SAMN05444679_10915 | Not Available | Positive | 2715099 - 2716070 | 34658.5 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05444679_10916 | Not Available | Negative | 2716074 - 2718365 | 83343.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10917 | Not Available | Negative | 2718362 - 2719339 | 33886.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN05444679_10918 | Not Available | Negative | 2719367 - 2720767 | 49338.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_10919 | Not Available | Positive | 2720899 - 2721816 | 32978.5 |
| asma-like c-terminal region | SAMN05444679_10920 | Not Available | Negative | 2721820 - 2723127 | 46766.1 |
| uncharacterized domain 1-containing protein | SAMN05444679_10921 | Not Available | Positive | 2723233 - 2723655 | 15324.4 |
| uracil-xanthine permease | SAMN05444679_10922 | Not Available | Positive | 2723705 - 2725063 | 46953.6 |
| hypothetical protein | SAMN05444679_10923 | Not Available | Negative | 2725030 - 2725362 | 12725.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
