Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma 54 modulation protein / s30ea ribosomal protein | SAMN05444679_101258 | Not Available | Negative | 232856 - 233212 | 12933.1 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05444679_101259 | Not Available | Positive | 233321 - 234229 | 33295.6 |
| smpa / omla family protein | SAMN05444679_101260 | Not Available | Negative | 234231 - 234821 | 21702.2 |
| acyltransferase family protein | SAMN05444679_101261 | Not Available | Negative | 234905 - 236080 | 44298.3 |
| transcriptional regulator, lyttr family | SAMN05444679_101262 | Not Available | Positive | 236234 - 237103 | 32916.9 |
| ribosome biogenesis gtpase a | SAMN05444679_101263 | Not Available | Positive | 237162 - 238112 | 34910.2 |
| rna polymerase, sigma subunit, ecf family | SAMN05444679_101264 | Not Available | Negative | 238116 - 239036 | 34599.0 |
| hypothetical protein | SAMN05444679_101265 | Not Available | Negative | 239017 - 239322 | 11218.3 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05444679_101266 | Not Available | Negative | 239319 - 240737 | 48790.7 |
| fic family protein | SAMN05444679_101267 | Not Available | Positive | 240831 - 241991 | 42854.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
