Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1094 | Not Available | Positive | 2706881 - 2707273 | 14331.5 |
| hypothetical protein | SAMN05444679_1095 | Not Available | Negative | 2707289 - 2708029 | 26128.3 |
| protein of unknown function | SAMN05444679_1096 | Not Available | Negative | 2708163 - 2708579 | 14692.1 |
| hypothetical protein | SAMN05444679_1097 | Not Available | Negative | 2708672 - 2709424 | 27154.9 |
| res domain-containing protein | SAMN05444679_1098 | Not Available | Negative | 2709549 - 2710022 | 17341.8 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN05444679_1099 | Not Available | Negative | 2710019 - 2710543 | 18349.2 |
| arac-type dna-binding protein | SAMN05444679_10910 | Not Available | Positive | 2710565 - 2711167 | 22391.9 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05444679_10911 | Not Available | Positive | 2711173 - 2711583 | 14896.6 |
| excinuclease abc, a subunit | SAMN05444679_10912 | Not Available | Positive | 2711625 - 2714012 | 84768.5 |
| alkylhydroperoxidase family enzyme, contains cxxc motif | SAMN05444679_10913 | Not Available | Negative | 2714056 - 2714631 | 21210.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
