Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feruloyl esterase | SAMN05444679_108265 | Not Available | Negative | 2695929 - 2698637 | 92594.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_108266 | Not Available | Positive | 2698753 - 2699658 | 32651.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_108267 | Not Available | Positive | 2699655 - 2700638 | 34529.9 |
| hypothetical protein | SAMN05444679_108268 | Not Available | Negative | 2700643 - 2701209 | 21379.0 |
| dna polymerase-4 | SAMN05444679_108269 | Not Available | Positive | 2701311 - 2702516 | 44103.3 |
| hypothetical protein | SAMN05444679_108270 | Not Available | Positive | 2702576 - 2702914 | 12304.8 |
| dna topoisomerase i, catalytic core | SAMN05444679_108271 | Not Available | Positive | 2702914 - 2703675 | 28057.7 |
| hypothetical protein | SAMN05444679_1091 | Not Available | Positive | 2703714 - 2703881 | 5863.01 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444679_1092 | Not Available | Positive | 2703884 - 2704834 | 33675.4 |
| feruloyl-coa synthase | SAMN05444679_1093 | Not Available | Positive | 2704859 - 2706673 | 65957.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
