Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | SAMN05444679_108255 | Not Available | Positive | 2683520 - 2685703 | 78669.8 |
| pas domain s-box-containing protein | SAMN05444679_108256 | Not Available | Positive | 2685897 - 2687795 | 69531.4 |
| cyanate lyase | SAMN05444679_108257 | Not Available | Negative | 2687820 - 2688263 | 16508.0 |
| nitrate/nitrite transport system atp-binding protein | SAMN05444679_108258 | Not Available | Negative | 2688296 - 2689120 | 29685.9 |
| nitrate/nitrite transport system permease protein | SAMN05444679_108259 | Not Available | Negative | 2689143 - 2690003 | 30732.5 |
| nitrate/nitrite transport system substrate-binding protein | SAMN05444679_108260 | Not Available | Negative | 2690008 - 2691369 | 50090.9 |
| two component transcriptional regulator, luxr family | SAMN05444679_108261 | Not Available | Negative | 2691495 - 2692169 | 23659.7 |
| pas/pac sensor signal transduction histidine kinase | SAMN05444679_108262 | Not Available | Negative | 2692166 - 2693341 | 43566.0 |
| l-lactate dehydrogenase (cytochrome) | SAMN05444679_108263 | Not Available | Positive | 2693427 - 2694584 | 42139.9 |
| hypothetical protein | SAMN05444679_108264 | Not Available | Negative | 2694601 - 2695929 | 47958.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
