Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_108235 | Not Available | Positive | 2674231 - 2674620 | 14279.1 |
| dinb superfamily protein | SAMN05444679_108236 | Not Available | Positive | 2674650 - 2675153 | 18664.0 |
| cupin domain-containing protein | SAMN05444679_108237 | Not Available | Positive | 2675176 - 2675547 | 13781.5 |
| protein of unknown function | SAMN05444679_108238 | Not Available | Positive | 2675566 - 2676120 | 20450.7 |
| methyltransferase domain-containing protein | SAMN05444679_108239 | Not Available | Positive | 2676135 - 2676917 | 29558.9 |
| hypothetical protein | SAMN05444679_108240 | Not Available | Positive | 2676914 - 2677288 | 13313.2 |
| protein of unknown function | SAMN05444679_108241 | Not Available | Positive | 2677269 - 2677754 | 17517.1 |
| protein of unknown function | SAMN05444679_108242 | Not Available | Positive | 2677768 - 2678181 | 14421.3 |
| hypothetical protein | SAMN05444679_108243 | Not Available | Positive | 2678210 - 2678509 | 11170.2 |
| transcriptional regulator, arac family | SAMN05444679_108244 | Not Available | Positive | 2678506 - 2679144 | 22896.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
