Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN05444679_108225 | Not Available | Positive | 2660752 - 2661504 | 27386.0 |
| extended signal peptide of type v secretion system | SAMN05444679_108226 | Not Available | Negative | 2661533 - 2662201 | 22633.0 |
| hypothetical protein | SAMN05444679_108227 | Not Available | Negative | 2662330 - 2662839 | 17916.7 |
| hypothetical protein | SAMN05444679_108228 | Not Available | Negative | 2662935 - 2664107 | 43886.2 |
| glycosyl transferases group 1 | SAMN05444679_108229 | Not Available | Negative | 2664135 - 2665379 | 45769.5 |
| hypothetical protein | SAMN05444679_108230 | Not Available | Positive | 2665466 - 2671432 | 215096.0 |
| acetyltransferase (gnat) family protein | SAMN05444679_108231 | Not Available | Positive | 2671476 - 2672054 | 21209.8 |
| uncharacterized conserved protein, duf1330 family | SAMN05444679_108232 | Not Available | Positive | 2672148 - 2672453 | 11388.5 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05444679_108233 | Not Available | Positive | 2672453 - 2673193 | 27132.7 |
| uncharacterized conserved protein | SAMN05444679_108234 | Not Available | Positive | 2673266 - 2674168 | 32855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
