Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l32p | SAMN05444679_108185 | Not Available | Negative | 2608780 - 2608962 | 6630.0 |
| uncharacterized protein | SAMN05444679_108186 | Not Available | Negative | 2609112 - 2609627 | 18687.7 |
| septum formation protein | SAMN05444679_108187 | Not Available | Positive | 2609699 - 2610280 | 20849.2 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444679_108188 | Not Available | Positive | 2610277 - 2611035 | 26809.5 |
| fucose permease | SAMN05444679_108189 | Not Available | Positive | 2611062 - 2612180 | 37768.7 |
| protease-4 | SAMN05444679_108190 | Not Available | Negative | 2612182 - 2613204 | 37208.7 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN05444679_108191 | Not Available | Negative | 2613206 - 2613571 | 13248.7 |
| phosphoglycolate phosphatase | SAMN05444679_108192 | Not Available | Negative | 2613582 - 2614250 | 24367.0 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05444679_108193 | Not Available | Negative | 2614247 - 2615299 | 37895.0 |
| ribonuclease e | SAMN05444679_108194 | Not Available | Positive | 2615840 - 2618860 | 110344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
