Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e regulatory protein, mucb/rseb | SAMN05444679_108175 | Not Available | Negative | 2600292 - 2601284 | 36231.1 |
| sigma-e factor negative regulatory protein rsea | SAMN05444679_108176 | Not Available | Negative | 2601382 - 2602017 | 22497.5 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN05444679_108177 | Not Available | Negative | 2602031 - 2602705 | 25178.0 |
| hypothetical protein | SAMN05444679_108178 | Not Available | Negative | 2602702 - 2603184 | 17631.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05444679_108179 | Not Available | Negative | 2603198 - 2604442 | 43631.9 |
| acyl carrier protein | SAMN05444679_108180 | Not Available | Negative | 2604536 - 2604775 | 8643.06 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05444679_108181 | Not Available | Negative | 2604876 - 2605619 | 25631.0 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05444679_108182 | Not Available | Negative | 2605646 - 2606599 | 32683.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05444679_108183 | Not Available | Negative | 2606653 - 2607630 | 34083.2 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05444679_108184 | Not Available | Negative | 2607630 - 2608658 | 35970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
