Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin cptb | SAMN05444679_108145 | Not Available | Positive | 2570678 - 2570980 | 11525.8 |
| citrate synthase | SAMN05444679_108146 | Not Available | Positive | 2571004 - 2572314 | 48520.7 |
| predicted small secreted protein | SAMN05444679_108147 | Not Available | Positive | 2572436 - 2572576 | 4861.0 |
| transcriptional regulator, lysr family | SAMN05444679_108148 | Not Available | Positive | 2572693 - 2573637 | 33930.9 |
| 3-isopropylmalate dehydratase, large subunit | SAMN05444679_108149 | Not Available | Positive | 2573672 - 2575093 | 50874.8 |
| 3-isopropylmalate dehydratase, small subunit | SAMN05444679_108150 | Not Available | Positive | 2575107 - 2575757 | 24403.2 |
| 3-isopropylmalate dehydrogenase | SAMN05444679_108151 | Not Available | Positive | 2575785 - 2576873 | 38997.0 |
| aspartate semialdehyde dehydrogenase | SAMN05444679_108152 | Not Available | Positive | 2577015 - 2578109 | 38724.0 |
| pilus assembly protein fimv | SAMN05444679_108153 | Not Available | Positive | 2578377 - 2581001 | 88948.4 |
| trna pseudouridine38-40 synthase | SAMN05444679_108154 | Not Available | Positive | 2581028 - 2581840 | 30099.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
