Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitase | SAMN05444679_108135 | Not Available | Negative | 2560141 - 2562726 | 92552.4 |
| hypothetical protein | SAMN05444679_108136 | Not Available | Negative | 2562790 - 2563353 | 20392.9 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444679_108137 | Not Available | Negative | 2563385 - 2564386 | 35098.8 |
| trans-aconitate 2-methyltransferase | SAMN05444679_108138 | Not Available | Negative | 2564443 - 2565219 | 28868.6 |
| malate dehydrogenase | SAMN05444679_108139 | Not Available | Negative | 2565238 - 2566224 | 34950.3 |
| gntr family transcriptional regulator | SAMN05444679_108140 | Not Available | Positive | 2566385 - 2567143 | 28080.8 |
| succinate dehydrogenase subunit c | SAMN05444679_108141 | Not Available | Positive | 2567304 - 2567750 | 16521.4 |
| succinate dehydrogenase subunit d | SAMN05444679_108142 | Not Available | Positive | 2567761 - 2568126 | 13802.4 |
| succinate dehydrogenase subunit a | SAMN05444679_108143 | Not Available | Positive | 2568131 - 2569939 | 65957.6 |
| succinate dehydrogenase subunit b | SAMN05444679_108144 | Not Available | Positive | 2569963 - 2570664 | 26649.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
