Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | SAMN05444679_108125 | Not Available | Positive | 2548391 - 2549227 | 32076.4 |
| hypothetical protein | SAMN05444679_108126 | Not Available | Positive | 2549266 - 2550516 | 44529.1 |
| salicylate hydroxylase | SAMN05444679_108127 | Not Available | Negative | 2550518 - 2551699 | 41014.4 |
| hypothetical protein | SAMN05444679_108128 | Not Available | Negative | 2551707 - 2551988 | 9628.5 |
| ferrous iron transport protein b | SAMN05444679_108129 | Not Available | Negative | 2551990 - 2553888 | 67816.2 |
| ferrous iron transport protein a | SAMN05444679_108130 | Not Available | Negative | 2553881 - 2554261 | 13599.2 |
| peptidase c13 family protein | SAMN05444679_108131 | Not Available | Positive | 2554271 - 2555677 | 52210.7 |
| aconitate hydratase | SAMN05444679_108132 | Not Available | Negative | 2555757 - 2558624 | 103636.0 |
| hypothetical protein | SAMN05444679_108133 | Not Available | Negative | 2558719 - 2559135 | 14152.8 |
| transcriptional regulator, contains xre-family hth domain | SAMN05444679_108134 | Not Available | Positive | 2559216 - 2560100 | 32100.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
