Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01666 family membrane protein | SAMN05444679_108115 | Not Available | Negative | 2537995 - 2540250 | 81529.9 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05444679_108116 | Not Available | Negative | 2540290 - 2540712 | 15676.7 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN05444679_108117 | Not Available | Negative | 2540712 - 2541563 | 31876.0 |
| putative peptidoglycan lipid ii flippase | SAMN05444679_108118 | Not Available | Negative | 2541619 - 2543184 | 55632.3 |
| ssu ribosomal protein s20p | SAMN05444679_108119 | Not Available | Positive | 2543301 - 2543615 | 11197.7 |
| protein of unknown function | SAMN05444679_108120 | Not Available | Negative | 2543742 - 2544065 | 11712.1 |
| acetylornithine aminotransferase | SAMN05444679_108121 | Not Available | Positive | 2544227 - 2545432 | 42864.0 |
| ornithine carbamoyltransferase | SAMN05444679_108122 | Not Available | Positive | 2545429 - 2546364 | 34849.4 |
| kynurenine formamidase | SAMN05444679_108123 | Not Available | Positive | 2546439 - 2547083 | 23066.7 |
| kynureninase | SAMN05444679_108124 | Not Available | Positive | 2547080 - 2548378 | 46656.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
