Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_108105 | Not Available | Positive | 2528921 - 2529367 | 16214.0 |
| inorganic phosphate transporter, pit family | SAMN05444679_108106 | Not Available | Negative | 2529525 - 2530535 | 35023.3 |
| hypothetical protein | SAMN05444679_108107 | Not Available | Negative | 2530549 - 2531226 | 25834.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05444679_108108 | Not Available | Negative | 2531283 - 2531744 | 16561.9 |
| poly(a) polymerase | SAMN05444679_108109 | Not Available | Negative | 2531741 - 2533297 | 57485.7 |
| regulatory inactivation of dnaa hda protein | SAMN05444679_108110 | Not Available | Negative | 2533325 - 2534011 | 25134.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05444679_108111 | Not Available | Positive | 2534185 - 2535249 | 36588.3 |
| predicted purr-regulated permease perm | SAMN05444679_108112 | Not Available | Positive | 2535264 - 2536322 | 37835.4 |
| nicotinamidase-related amidase | SAMN05444679_108113 | Not Available | Positive | 2536431 - 2537003 | 20415.3 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05444679_108114 | Not Available | Positive | 2537017 - 2538006 | 35571.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
