Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | SAMN05444679_10895 | Not Available | Positive | 2521090 - 2521995 | 32970.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_10896 | Not Available | Positive | 2521992 - 2523113 | 40591.3 |
| histidinol-phosphate aminotransferase | SAMN05444679_10897 | Not Available | Negative | 2523120 - 2524145 | 36809.2 |
| adenosylcobinamide-phosphate synthase | SAMN05444679_10898 | Not Available | Negative | 2524216 - 2525217 | 36284.9 |
| nudix domain-containing protein | SAMN05444679_10899 | Not Available | Negative | 2525270 - 2525986 | 26173.4 |
| lsu ribosomal protein l19p | SAMN05444679_108100 | Not Available | Negative | 2526155 - 2526535 | 14034.0 |
| trna (guanine37-n1)-methyltransferase | SAMN05444679_108101 | Not Available | Negative | 2526634 - 2527380 | 27301.8 |
| 16s rrna processing protein rimm | SAMN05444679_108102 | Not Available | Negative | 2527404 - 2527958 | 20042.9 |
| small subunit ribosomal protein s16 | SAMN05444679_108103 | Not Available | Negative | 2527974 - 2528237 | 9652.7 |
| phosphinothricin acetyltransferase | SAMN05444679_108104 | Not Available | Positive | 2528403 - 2528924 | 18505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
