Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444679_101238 | Not Available | Positive | 215118 - 216356 | 43331.4 |
| cdp-4-dehydro-6-deoxyglucose reductase | SAMN05444679_101239 | Not Available | Negative | 216345 - 216626 | 10031.9 |
| uncharacterized conserved protein | SAMN05444679_101240 | Not Available | Negative | 216623 - 216883 | 9734.79 |
| hypothetical protein | SAMN05444679_101241 | Not Available | Negative | 216880 - 217026 | 5195.4 |
| ribosomal protein s18 acetylase rimi | SAMN05444679_101242 | Not Available | Positive | 217121 - 217636 | 19047.8 |
| hypothetical protein | SAMN05444679_101243 | Not Available | Positive | 217649 - 218554 | 30867.4 |
| trna 2-selenouridine synthase | SAMN05444679_101244 | Not Available | Negative | 218541 - 219608 | 39629.6 |
| hypothetical protein | SAMN05444679_101245 | Not Available | Negative | 219608 - 219799 | 6739.53 |
| outer membrane autotransporter barrel domain-containing protein | SAMN05444679_101246 | Not Available | Positive | 219960 - 222908 | 98685.4 |
| hypothetical protein | SAMN05444679_101247 | Not Available | Positive | 222990 - 223409 | 15172.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
