Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate carboxypeptidase | SAMN05444679_10875 | Not Available | Negative | 2498349 - 2499635 | 46056.5 |
| dna polymerase i | SAMN05444679_10876 | Not Available | Negative | 2499661 - 2502453 | 102265.0 |
| hypothetical protein | SAMN05444679_10877 | Not Available | Positive | 2502551 - 2502910 | 12368.5 |
| homoserine kinase | SAMN05444679_10878 | Not Available | Positive | 2502920 - 2503978 | 38411.9 |
| hypothetical protein | SAMN05444679_10879 | Not Available | Positive | 2504005 - 2504808 | 28486.6 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05444679_10880 | Not Available | Negative | 2504815 - 2507184 | 88036.5 |
| gmp reductase | SAMN05444679_10881 | Not Available | Positive | 2507443 - 2508420 | 35443.9 |
| arylformamidase | SAMN05444679_10882 | Not Available | Negative | 2508442 - 2509308 | 31583.7 |
| Trna-ala | Not Available | Not Available | Positive | 2509367 - 2509442 | Not Available |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444679_10884 | Not Available | Negative | 2509487 - 2510194 | 24375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
