Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_10865 | Not Available | Positive | 2490631 - 2491236 | 21669.3 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05444679_10866 | Not Available | Positive | 2491400 - 2491882 | 18000.4 |
| hypothetical protein | SAMN05444679_10867 | Not Available | Positive | 2491950 - 2492159 | 7702.01 |
| uncharacterized membrane protein ycap, duf421 family | SAMN05444679_10868 | Not Available | Negative | 2492175 - 2492723 | 20414.9 |
| hypothetical protein | SAMN05444679_10869 | Not Available | Negative | 2492746 - 2492982 | 8469.98 |
| zinc and cadmium transporter | SAMN05444679_10870 | Not Available | Negative | 2493112 - 2493999 | 31590.3 |
| carboxymethylenebutenolidase | SAMN05444679_10871 | Not Available | Negative | 2494072 - 2494980 | 31709.8 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_10872 | Not Available | Negative | 2495110 - 2495994 | 31796.5 |
| d-amino-acid dehydrogenase | SAMN05444679_10873 | Not Available | Positive | 2496219 - 2497427 | 42566.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_10874 | Not Available | Negative | 2497424 - 2498326 | 32261.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
