Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05444679_10855 | Not Available | Negative | 2480683 - 2481762 | 39697.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444679_10856 | Not Available | Negative | 2481852 - 2483735 | 66974.6 |
| farnesyl diphosphate synthase | SAMN05444679_10857 | Not Available | Negative | 2483751 - 2484668 | 31608.0 |
| exodeoxyribonuclease vii small subunit | SAMN05444679_10858 | Not Available | Negative | 2484665 - 2484958 | 10395.5 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444679_10859 | Not Available | Positive | 2485114 - 2486250 | 43392.2 |
| uncharacterized membrane protein | SAMN05444679_10860 | Not Available | Positive | 2486275 - 2487192 | 32200.1 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN05444679_10861 | Not Available | Positive | 2487203 - 2488114 | 32034.0 |
| protein of unknown function | SAMN05444679_10862 | Not Available | Positive | 2488111 - 2488665 | 19492.4 |
| putative abc transport system atp-binding protein | SAMN05444679_10863 | Not Available | Positive | 2488662 - 2489369 | 25071.4 |
| putative abc transport system permease protein | SAMN05444679_10864 | Not Available | Positive | 2489366 - 2490628 | 44928.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
