Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein tadg | SAMN05444679_10825 | Not Available | Negative | 2452581 - 2453012 | 15393.7 |
| tade-like protein | SAMN05444679_10826 | Not Available | Negative | 2453009 - 2453458 | 15964.2 |
| putative flp pilus-assembly tade/g-like | SAMN05444679_10827 | Not Available | Negative | 2453464 - 2454738 | 43877.0 |
| pilus assembly protein flp/pila | SAMN05444679_10828 | Not Available | Negative | 2454771 - 2454947 | 5914.48 |
| pilus assembly protein flp/pila | SAMN05444679_10829 | Not Available | Negative | 2455072 - 2455284 | 7207.76 |
| hypothetical protein | SAMN05444679_10830 | Not Available | Negative | 2455399 - 2455674 | 9560.49 |
| pilus assembly protein cpac | SAMN05444679_10831 | Not Available | Negative | 2455684 - 2457153 | 50816.4 |
| pilus assembly protein cpab | SAMN05444679_10832 | Not Available | Negative | 2457180 - 2458028 | 29308.9 |
| prepilin peptidase cpaa | SAMN05444679_10833 | Not Available | Negative | 2458067 - 2458651 | 20662.1 |
| hypothetical protein | SAMN05444679_10834 | Not Available | Negative | 2458664 - 2458810 | 5441.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
