Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin pare1/3/4 | SAMN05444679_10815 | Not Available | Positive | 2441985 - 2442314 | 12571.7 |
| hypothetical protein | SAMN05444679_10816 | Not Available | Negative | 2442383 - 2443525 | 40231.0 |
| histidine kinase | SAMN05444679_10817 | Not Available | Positive | 2443751 - 2445436 | 61891.8 |
| two component transcriptional regulator, luxr family | SAMN05444679_10818 | Not Available | Positive | 2445447 - 2446133 | 25324.8 |
| hypothetical protein | SAMN05444679_10819 | Not Available | Negative | 2446310 - 2446468 | 5602.97 |
| hypothetical protein | SAMN05444679_10820 | Not Available | Negative | 2446507 - 2448012 | 54156.1 |
| tight adherence protein c | SAMN05444679_10821 | Not Available | Negative | 2448059 - 2448973 | 33460.6 |
| tight adherence protein b | SAMN05444679_10822 | Not Available | Negative | 2448987 - 2449979 | 36843.6 |
| pilus assembly protein cpaf | SAMN05444679_10823 | Not Available | Negative | 2449994 - 2451364 | 50550.7 |
| pilus assembly protein cpae | SAMN05444679_10824 | Not Available | Negative | 2451410 - 2452558 | 41277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
