Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgg | SAMN05444679_1085 | Not Available | Negative | 2435614 - 2436396 | 27664.7 |
| flagellar basal-body rod protein flgf | SAMN05444679_1086 | Not Available | Negative | 2436425 - 2437168 | 25293.2 |
| flagellar hook protein flge | SAMN05444679_1087 | Not Available | Negative | 2437176 - 2438390 | 41332.1 |
| flagellar basal-body rod modification protein flgd | SAMN05444679_1088 | Not Available | Negative | 2438471 - 2439157 | 23283.3 |
| flagellar basal-body rod protein flgc | SAMN05444679_1089 | Not Available | Negative | 2439182 - 2439598 | 14567.5 |
| flagellar basal-body rod protein flgb | SAMN05444679_10810 | Not Available | Negative | 2439607 - 2440011 | 14736.3 |
| flagella basal body p-ring formation protein flga | SAMN05444679_10811 | Not Available | Positive | 2440177 - 2440866 | 23697.8 |
| anti-sigma-28 factor, flgm family | SAMN05444679_10812 | Not Available | Positive | 2440926 - 2441222 | 10194.0 |
| flagella synthesis protein flgn | SAMN05444679_10813 | Not Available | Positive | 2441219 - 2441677 | 16079.1 |
| antitoxin pard1/3/4 | SAMN05444679_10814 | Not Available | Positive | 2441737 - 2441988 | 9327.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
