Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_107274 | Not Available | Positive | 2426653 - 2426856 | 7253.85 |
| signal transduction histidine kinase | SAMN05444679_107275 | Not Available | Positive | 2426982 - 2428418 | 53237.7 |
| putative transcriptional regulator | SAMN05444679_107276 | Not Available | Positive | 2428815 - 2429180 | 13393.0 |
| fic/doc family protein | SAMN05444679_107277 | Not Available | Negative | 2429272 - 2430831 | 58165.9 |
| aaa domain-containing protein | SAMN05444679_107278 | Not Available | Positive | 2431271 - 2432401 | 41115.9 |
| hypothetical protein | SAMN05444679_107279 | Not Available | Positive | 2432592 - 2432666 | 2692.33 |
| chew-like domain-containing protein | SAMN05444679_1081 | Not Available | Negative | 2432667 - 2432837 | 6266.45 |
| flagellar protein flgj | SAMN05444679_1082 | Not Available | Negative | 2432849 - 2433817 | 34441.6 |
| flagellar p-ring protein precursor flgi | SAMN05444679_1083 | Not Available | Negative | 2433819 - 2434928 | 38097.2 |
| flagellar l-ring protein precursor flgh | SAMN05444679_1084 | Not Available | Negative | 2434931 - 2435614 | 24126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
