Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_107264 | Not Available | Positive | 2414728 - 2415156 | 15586.1 |
| hypothetical protein | SAMN05444679_107265 | Not Available | Positive | 2415308 - 2415514 | 7755.42 |
| short chain dehydrogenase | SAMN05444679_107266 | Not Available | Negative | 2415532 - 2415819 | 9795.79 |
| cbs domain-containing protein | SAMN05444679_107267 | Not Available | Positive | 2415843 - 2416283 | 16382.2 |
| methyltransferase domain-containing protein | SAMN05444679_107268 | Not Available | Positive | 2416306 - 2416932 | 22875.1 |
| fructose-bisphosphate aldolase | SAMN05444679_107269 | Not Available | Negative | 2416929 - 2417945 | 36218.3 |
| glutamate dehydrogenase (nad) | SAMN05444679_107270 | Not Available | Positive | 2418057 - 2422883 | 177652.0 |
| phod-like phosphatase | SAMN05444679_107271 | Not Available | Positive | 2422981 - 2423934 | 34330.6 |
| two component transcriptional regulator, luxr family | SAMN05444679_107272 | Not Available | Positive | 2424014 - 2424694 | 24842.7 |
| hypothetical protein | SAMN05444679_107273 | Not Available | Positive | 2424705 - 2426555 | 66191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
