Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444679_101228 | Not Available | Negative | 207640 - 208047 | 14889.9 |
| aminoglycoside 6'-n-acetyltransferase/aminoglycoside 6'-n-acetyltransferase-1b/aminoglycoside 6'-n-acetyltransferase-2 | SAMN05444679_101229 | Not Available | Negative | 208044 - 208598 | 20292.9 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05444679_101230 | Not Available | Negative | 208579 - 209061 | 17862.3 |
| nadh dehydrogenase | SAMN05444679_101231 | Not Available | Negative | 209084 - 210430 | 48091.2 |
| ergothioneine biosynthesis protein egtb | SAMN05444679_101232 | Not Available | Positive | 210568 - 211818 | 46176.5 |
| dimethylhistidine n-methyltransferase | SAMN05444679_101233 | Not Available | Positive | 211818 - 212804 | 36035.1 |
| uncharacterized conserved protein, duf427 family | SAMN05444679_101234 | Not Available | Positive | 212842 - 213123 | 10657.4 |
| hypothetical protein | SAMN05444679_101235 | Not Available | Positive | 213120 - 213863 | 27484.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_101236 | Not Available | Positive | 213968 - 214405 | 14942.0 |
| ribosomal large subunit pseudouridine synthase a | SAMN05444679_101237 | Not Available | Negative | 214428 - 215069 | 24114.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
