Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_107254 | Not Available | Negative | 2404996 - 2405931 | 34813.7 |
| 2,4-dienoyl-coa reductase | SAMN05444679_107255 | Not Available | Positive | 2406039 - 2408099 | 75337.4 |
| nipsnap protein | SAMN05444679_107256 | Not Available | Negative | 2408438 - 2408743 | 11792.1 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05444679_107257 | Not Available | Negative | 2408892 - 2409776 | 31682.3 |
| 2-pyrone-4,6-dicarboxylate lactonase | SAMN05444679_107258 | Not Available | Positive | 2409847 - 2410686 | 30590.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_107259 | Not Available | Positive | 2410683 - 2411483 | 27591.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_107260 | Not Available | Positive | 2411514 - 2412473 | 33569.6 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444679_107261 | Not Available | Positive | 2412473 - 2413000 | 19199.5 |
| hypothetical protein | SAMN05444679_107262 | Not Available | Positive | 2413014 - 2413598 | 21356.1 |
| hypothetical protein | SAMN05444679_107263 | Not Available | Negative | 2413583 - 2413918 | 12633.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
