Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | SAMN05444679_107234 | Not Available | Positive | 2384626 - 2385957 | 48440.9 |
| Trna-ser | Not Available | Not Available | Positive | 2386003 - 2386092 | Not Available |
| endonuclease yncb, thermonuclease family | SAMN05444679_107236 | Not Available | Negative | 2386567 - 2387052 | 18015.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_107237 | Not Available | Positive | 2387283 - 2388212 | 32875.9 |
| hypothetical protein | SAMN05444679_107238 | Not Available | Negative | 2388253 - 2390382 | 76288.2 |
| methyltransferase, fkbm family | SAMN05444679_107239 | Not Available | Negative | 2390734 - 2391618 | 33010.7 |
| hypothetical protein | SAMN05444679_107240 | Not Available | Positive | 2391722 - 2391913 | 6978.76 |
| hypothetical protein | SAMN05444679_107241 | Not Available | Positive | 2392442 - 2393062 | 21305.2 |
| sarcosine oxidase | SAMN05444679_107242 | Not Available | Negative | 2393103 - 2394395 | 46010.2 |
| transketolase | SAMN05444679_107243 | Not Available | Negative | 2394589 - 2395587 | 36031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
