Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_107224 | Not Available | Negative | 2377657 - 2378367 | 26107.8 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444679_107225 | Not Available | Negative | 2378364 - 2379059 | 25265.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_107226 | Not Available | Negative | 2379140 - 2379970 | 29684.9 |
| hemoglobin | SAMN05444679_107227 | Not Available | Positive | 2380059 - 2380478 | 16058.2 |
| dna-nicking endonuclease, smr domain | SAMN05444679_107228 | Not Available | Negative | 2380475 - 2381131 | 24001.1 |
| hypothetical protein | SAMN05444679_107229 | Not Available | Negative | 2381164 - 2381610 | 15743.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | SAMN05444679_107230 | Not Available | Positive | 2381674 - 2382129 | 16076.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05444679_107231 | Not Available | Positive | 2382126 - 2383175 | 37126.3 |
| threonine dehydratase | SAMN05444679_107232 | Not Available | Positive | 2383172 - 2384137 | 33801.8 |
| phnb protein | SAMN05444679_107233 | Not Available | Negative | 2384153 - 2384563 | 14637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
