Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase beta subunit | SAMN05444679_107214 | Not Available | Positive | 2367349 - 2367969 | 21981.2 |
| hypothetical protein | SAMN05444679_107215 | Not Available | Positive | 2367966 - 2368220 | 8904.35 |
| formate dehydrogenase gamma subunit | SAMN05444679_107216 | Not Available | Positive | 2368237 - 2369457 | 43741.3 |
| hypothetical protein | SAMN05444679_107217 | Not Available | Positive | 2369454 - 2369852 | 13141.8 |
| fdhd protein | SAMN05444679_107218 | Not Available | Positive | 2369849 - 2370721 | 31282.0 |
| putative abc transport system permease protein | SAMN05444679_107219 | Not Available | Positive | 2370768 - 2373284 | 89422.2 |
| cystathionine beta-synthase | SAMN05444679_107220 | Not Available | Positive | 2373329 - 2374702 | 48973.5 |
| cystathionine gamma-lyase | SAMN05444679_107221 | Not Available | Positive | 2374699 - 2375886 | 43007.5 |
| isopenicillin n synthase | SAMN05444679_107222 | Not Available | Negative | 2375905 - 2376927 | 37729.2 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_107223 | Not Available | Negative | 2376917 - 2377660 | 27392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
