Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent formate dehydrogenase flavoprotein subunit | SAMN05444679_107204 | Not Available | Positive | 2351699 - 2353507 | 65622.8 |
| nad-dependent formate dehydrogenase catalytic subunit /nad-dependent formate dehydrogenase iron-sulfur protein | SAMN05444679_107205 | Not Available | Positive | 2353504 - 2356452 | 106298.0 |
| alginate lyase | SAMN05444679_107206 | Not Available | Positive | 2356578 - 2358842 | 79989.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_107207 | Not Available | Positive | 2358951 - 2360087 | 40419.5 |
| protein of unknown function | SAMN05444679_107208 | Not Available | Positive | 2360162 - 2360746 | 22091.0 |
| protein of unknown function | SAMN05444679_107209 | Not Available | Positive | 2360739 - 2361347 | 21964.3 |
| 4fe-4s binding domain-containing protein | SAMN05444679_107210 | Not Available | Positive | 2361307 - 2363385 | 73613.8 |
| chaperone tord involved in molybdoenzyme tora maturation | SAMN05444679_107211 | Not Available | Positive | 2363382 - 2363999 | 22275.3 |
| formate dehydrogenase region tat target | SAMN05444679_107212 | Not Available | Positive | 2364104 - 2364328 | 7498.86 |
| formate dehydrogenase major subunit | SAMN05444679_107213 | Not Available | Positive | 2364343 - 2367336 | 110382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
