Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantothenate synthetase | SAMN05444679_107174 | Not Available | Negative | 2323145 - 2323975 | 30876.4 |
| ketopantoate hydroxymethyltransferase | SAMN05444679_107175 | Not Available | Negative | 2323989 - 2324867 | 30632.2 |
| l-aspartate oxidase | SAMN05444679_107176 | Not Available | Negative | 2324923 - 2326494 | 56447.4 |
| condensin subunit scpa | SAMN05444679_107177 | Not Available | Negative | 2326675 - 2327544 | 32840.0 |
| protein of unknown function | SAMN05444679_107178 | Not Available | Negative | 2327584 - 2327790 | 8067.53 |
| hypothetical protein | SAMN05444679_107179 | Not Available | Positive | 2327923 - 2328588 | 22534.2 |
| beta-barrel assembly machine subunit bame | SAMN05444679_107180 | Not Available | Positive | 2328589 - 2329089 | 18740.3 |
| sulfate permease, sulp family | SAMN05444679_107181 | Not Available | Negative | 2329086 - 2330762 | 59412.1 |
| hypothetical protein | SAMN05444679_107182 | Not Available | Negative | 2330791 - 2331003 | 6729.22 |
| methionyl-trna synthetase | SAMN05444679_107183 | Not Available | Negative | 2331012 - 2333090 | 76939.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
