Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat repeat-containing protein | SAMN05444679_101218 | Not Available | Negative | 199994 - 201058 | 39345.5 |
| outer membrane protein, yaio family | SAMN05444679_101219 | Not Available | Negative | 201039 - 201797 | 27893.1 |
| response regulator receiver domain-containing protein | SAMN05444679_101220 | Not Available | Negative | 201794 - 202189 | 14812.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_101221 | Not Available | Negative | 202402 - 203367 | 33948.1 |
| osmotically inducible protein osmc | SAMN05444679_101222 | Not Available | Negative | 203423 - 203863 | 15205.0 |
| fatty-acyl-coa synthase | SAMN05444679_101223 | Not Available | Positive | 204014 - 205714 | 62505.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_101224 | Not Available | Negative | 205711 - 206196 | 17281.2 |
| ribosomal protein s18 acetylase rimi | SAMN05444679_101225 | Not Available | Negative | 206193 - 206615 | 15892.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN05444679_101226 | Not Available | Negative | 206612 - 207178 | 21034.2 |
| uncharacterized domain 1-containing protein | SAMN05444679_101227 | Not Available | Negative | 207193 - 207612 | 14650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
