Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_107154 | Not Available | Negative | 2307788 - 2308237 | 16322.8 |
| hypothetical protein | SAMN05444679_107155 | Not Available | Negative | 2308227 - 2308607 | 12974.9 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN05444679_107156 | Not Available | Negative | 2308641 - 2309021 | 13401.6 |
| protein of unknown function | SAMN05444679_107157 | Not Available | Negative | 2309076 - 2309237 | 5577.35 |
| signal transduction histidine kinase | SAMN05444679_107158 | Not Available | Negative | 2309413 - 2310771 | 49802.3 |
| two component transcriptional regulator, luxr family | SAMN05444679_107159 | Not Available | Positive | 2310879 - 2311511 | 23268.2 |
| response regulator receiver domain-containing protein | SAMN05444679_107160 | Not Available | Negative | 2311584 - 2311988 | 14800.5 |
| hypothetical protein | SAMN05444679_107161 | Not Available | Positive | 2312275 - 2312481 | 6819.45 |
| hypothetical protein | SAMN05444679_107162 | Not Available | Positive | 2312478 - 2314496 | 72264.5 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN05444679_107163 | Not Available | Negative | 2314503 - 2315264 | 26747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
