Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative regulatory protein, fmdb family | SAMN05444679_107144 | Not Available | Positive | 2300870 - 2301220 | 11201.1 |
| uncharacterized membrane protein | SAMN05444679_107145 | Not Available | Positive | 2301237 - 2301857 | 22410.7 |
| aspartyl-trna synthetase | SAMN05444679_107146 | Not Available | Positive | 2301889 - 2303694 | 67118.8 |
| dihydroneopterin triphosphate pyrophosphatase | SAMN05444679_107147 | Not Available | Positive | 2303771 - 2304238 | 17623.8 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444679_107148 | Not Available | Positive | 2304235 - 2304993 | 28429.3 |
| gtp cyclohydrolase i | SAMN05444679_107149 | Not Available | Positive | 2305064 - 2305795 | 27761.5 |
| sensors of blue-light using fad | SAMN05444679_107150 | Not Available | Positive | 2305801 - 2306223 | 15360.6 |
| hypothetical protein | SAMN05444679_107151 | Not Available | Positive | 2306255 - 2307082 | 29035.1 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05444679_107152 | Not Available | Positive | 2307199 - 2307396 | 6789.03 |
| ferritin-like domain-containing protein | SAMN05444679_107153 | Not Available | Negative | 2307336 - 2307701 | 13344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
