Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444679_107134 | Not Available | Negative | 2287711 - 2289021 | 47653.4 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_107135 | Not Available | Positive | 2289215 - 2290444 | 43714.8 |
| fe-s oxidoreductase | SAMN05444679_107136 | Not Available | Positive | 2290531 - 2294409 | 142006.0 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN05444679_107137 | Not Available | Positive | 2294406 - 2294846 | 16398.7 |
| duf971 family protein | SAMN05444679_107138 | Not Available | Positive | 2294846 - 2295259 | 14752.2 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05444679_107139 | Not Available | Positive | 2295352 - 2296083 | 26661.3 |
| predicted lipid-binding transport protein, tim44 family | SAMN05444679_107140 | Not Available | Positive | 2296116 - 2297165 | 35569.0 |
| ubiquinone biosynthesis protein ubij | SAMN05444679_107141 | Not Available | Positive | 2297217 - 2297771 | 20379.3 |
| 2-octaprenylphenol hydroxylase | SAMN05444679_107142 | Not Available | Positive | 2297768 - 2299333 | 59617.3 |
| transporter, sss family | SAMN05444679_107143 | Not Available | Positive | 2299348 - 2300796 | 51990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
