Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monothiol glutaredoxin | SAMN05444679_107124 | Not Available | Negative | 2277608 - 2277934 | 11975.5 |
| release factor glutamine methyltransferase | SAMN05444679_107125 | Not Available | Negative | 2277964 - 2278815 | 30013.8 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN05444679_107126 | Not Available | Negative | 2278815 - 2279903 | 40539.7 |
| glutamyl-trna reductase | SAMN05444679_107127 | Not Available | Negative | 2279999 - 2281270 | 46096.6 |
| hypothetical protein | SAMN05444679_107128 | Not Available | Positive | 2281354 - 2281632 | 9991.55 |
| small-conductance mechanosensitive channel | SAMN05444679_107129 | Not Available | Negative | 2281646 - 2284048 | 85273.7 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444679_107130 | Not Available | Negative | 2284092 - 2284832 | 26700.7 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_107131 | Not Available | Negative | 2284829 - 2285836 | 36899.8 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444679_107132 | Not Available | Negative | 2285856 - 2286707 | 31434.6 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444679_107133 | Not Available | Negative | 2286722 - 2287603 | 32461.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
