Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l27 | SAMN05444679_107114 | Not Available | Positive | 2268407 - 2268664 | 8796.66 |
| gtp-binding protein | SAMN05444679_107115 | Not Available | Positive | 2268733 - 2269785 | 37951.6 |
| glutamate 5-kinase | SAMN05444679_107116 | Not Available | Positive | 2269787 - 2270938 | 40839.1 |
| cnp1-like family protein | SAMN05444679_107117 | Not Available | Negative | 2270943 - 2271536 | 21879.3 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN05444679_107118 | Not Available | Negative | 2271484 - 2272134 | 25780.4 |
| prolyl-trna synthetase | SAMN05444679_107119 | Not Available | Positive | 2272168 - 2274006 | 67074.7 |
| transglycosylase slt domain-containing protein | SAMN05444679_107120 | Not Available | Positive | 2274003 - 2274647 | 23985.8 |
| hemolysin, contains cbs domains | SAMN05444679_107121 | Not Available | Negative | 2274639 - 2275949 | 48321.8 |
| atp-dependent lon protease | SAMN05444679_107122 | Not Available | Negative | 2276001 - 2276999 | 36890.2 |
| uncharacterized protein, rmlc-like cupin domain | SAMN05444679_107123 | Not Available | Negative | 2277100 - 2277588 | 17555.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
