Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapd | SAMN05444679_107104 | Not Available | Negative | 2258799 - 2259551 | 28311.1 |
| hypothetical protein | SAMN05444679_107105 | Not Available | Negative | 2259628 - 2260638 | 37756.8 |
| alginate o-acetyltransferase complex protein algi | SAMN05444679_107106 | Not Available | Negative | 2260640 - 2262130 | 55682.3 |
| dephospho-coa kinase | SAMN05444679_107107 | Not Available | Negative | 2262214 - 2262813 | 21118.4 |
| type 4 prepilin peptidase 1 aspartic peptidase. merops family a24a | SAMN05444679_107108 | Not Available | Negative | 2262834 - 2263676 | 29941.1 |
| type iv pilus assembly protein pilc | SAMN05444679_107109 | Not Available | Negative | 2263676 - 2264902 | 44420.7 |
| type iv pilus assembly protein pilb | SAMN05444679_107110 | Not Available | Negative | 2264923 - 2266659 | 62555.4 |
| Trna-pro | Not Available | Not Available | Positive | 2266778 - 2266854 | Not Available |
| octaprenyl-diphosphate synthase | SAMN05444679_107112 | Not Available | Negative | 2266904 - 2267896 | 34961.1 |
| lsu ribosomal protein l21p | SAMN05444679_107113 | Not Available | Positive | 2268083 - 2268394 | 11212.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
