Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05444679_10784 | Not Available | Positive | 2239261 - 2240313 | 35950.6 |
| large conductance mechanosensitive channel | SAMN05444679_10785 | Not Available | Negative | 2240300 - 2240728 | 15259.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN05444679_10786 | Not Available | Positive | 2240882 - 2241496 | 21919.2 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN05444679_10787 | Not Available | Positive | 2241510 - 2242910 | 52731.2 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | SAMN05444679_10788 | Not Available | Positive | 2242927 - 2243682 | 28183.0 |
| rna polymerase-associated protein | SAMN05444679_10789 | Not Available | Positive | 2243784 - 2244395 | 23723.9 |
| stringent starvation protein b | SAMN05444679_10790 | Not Available | Positive | 2244416 - 2244991 | 20104.5 |
| Trna-thr | Not Available | Not Available | Positive | 2245041 - 2245116 | Not Available |
| fic family protein | SAMN05444679_10792 | Not Available | Positive | 2246121 - 2247329 | 45319.0 |
| uncharacterized protein | SAMN05444679_10793 | Not Available | Positive | 2247720 - 2248322 | 22724.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
