Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | SAMN05444679_10774 | Not Available | Positive | 2233094 - 2233873 | 27133.4 |
| phosphoribosyl-amp cyclohydrolase | SAMN05444679_10775 | Not Available | Positive | 2233888 - 2234289 | 15120.8 |
| phosphoribosyl-atp pyrophosphatase | SAMN05444679_10776 | Not Available | Positive | 2234286 - 2234675 | 14179.7 |
| uncharacterized membrane protein | SAMN05444679_10777 | Not Available | Positive | 2234685 - 2235074 | 14477.1 |
| histidine triad (hit) family protein | SAMN05444679_10778 | Not Available | Positive | 2235064 - 2235423 | 13223.2 |
| sec-independent protein translocase protein tata | SAMN05444679_10779 | Not Available | Positive | 2235493 - 2235735 | 8434.21 |
| sec-independent protein translocase protein tatb | SAMN05444679_10780 | Not Available | Positive | 2235749 - 2236207 | 16941.4 |
| sec-independent protein translocase protein tatc | SAMN05444679_10781 | Not Available | Positive | 2236238 - 2237071 | 30671.3 |
| serine pepetdase degs | SAMN05444679_10782 | Not Available | Negative | 2237102 - 2238328 | 42630.0 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05444679_10783 | Not Available | Positive | 2238491 - 2239264 | 27384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
