Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase (homohexameric) | SAMN05444679_10764 | Not Available | Positive | 2224288 - 2224929 | 22982.1 |
| histidinol dehydrogenase | SAMN05444679_10765 | Not Available | Positive | 2224932 - 2226248 | 46632.6 |
| hypothetical protein | SAMN05444679_10766 | Not Available | Positive | 2226262 - 2226621 | 13106.9 |
| histidinol phosphate aminotransferase apoenzyme | SAMN05444679_10767 | Not Available | Positive | 2226627 - 2227724 | 39048.8 |
| imidazoleglycerol-phosphate dehydratase | SAMN05444679_10768 | Not Available | Positive | 2227721 - 2228350 | 22462.8 |
| glutamine amidotransferase | SAMN05444679_10769 | Not Available | Positive | 2228383 - 2228997 | 22616.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05444679_10770 | Not Available | Positive | 2229045 - 2229788 | 26181.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_10771 | Not Available | Negative | 2229794 - 2230729 | 33890.9 |
| na+/h+-dicarboxylate symporter | SAMN05444679_10772 | Not Available | Negative | 2230739 - 2232046 | 46387.4 |
| glucose-6-phosphate 1-epimerase | SAMN05444679_10773 | Not Available | Positive | 2232228 - 2233070 | 30290.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
