Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, merr family | SAMN05444679_101208 | Not Available | Positive | 190154 - 190627 | 17407.8 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444679_101209 | Not Available | Negative | 190682 - 191674 | 35952.0 |
| protein of unknown function | SAMN05444679_101210 | Not Available | Negative | 191671 - 192249 | 20985.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_101211 | Not Available | Negative | 192317 - 193084 | 27681.1 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_101212 | Not Available | Negative | 193068 - 193721 | 23624.6 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444679_101213 | Not Available | Negative | 193724 - 194386 | 23852.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_101214 | Not Available | Negative | 194399 - 195190 | 27723.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_101215 | Not Available | Negative | 195187 - 195936 | 27029.5 |
| pas domain s-box-containing protein | SAMN05444679_101216 | Not Available | Positive | 196091 - 198592 | 91963.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05444679_101217 | Not Available | Negative | 198603 - 199868 | 47354.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
