Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | SAMN05444679_1074 | Not Available | Positive | 2159099 - 2160256 | 41577.0 |
| protein of unknown function | SAMN05444679_1075 | Not Available | Negative | 2160354 - 2160509 | 5672.94 |
| hippurate hydrolase | SAMN05444679_1076 | Not Available | Negative | 2160704 - 2161930 | 43091.1 |
| putative hydrolase of the had superfamily | SAMN05444679_1077 | Not Available | Negative | 2161927 - 2162625 | 25977.6 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05444679_1078 | Not Available | Negative | 2162802 - 2163866 | 38740.5 |
| 2,4-dihydroxyhept-2-enedioate aldolase | SAMN05444679_1079 | Not Available | Negative | 2163890 - 2164690 | 27535.1 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05444679_10710 | Not Available | Negative | 2164706 - 2166175 | 51892.0 |
| altronate hydrolase | SAMN05444679_10711 | Not Available | Negative | 2166215 - 2167765 | 54545.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10712 | Not Available | Negative | 2167789 - 2168772 | 34348.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_10713 | Not Available | Positive | 2168879 - 2169832 | 34959.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
