Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444679_106285 | Not Available | Positive | 2133648 - 2134589 | 34300.8 |
| agmatinase | SAMN05444679_106286 | Not Available | Negative | 2134608 - 2135585 | 35148.1 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444679_106287 | Not Available | Positive | 2135734 - 2136675 | 33663.3 |
| aspartate racemase | SAMN05444679_106288 | Not Available | Negative | 2136712 - 2138172 | 52490.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_106289 | Not Available | Positive | 2138269 - 2139165 | 32312.5 |
| chat domain-containing protein | SAMN05444679_106290 | Not Available | Positive | 2139436 - 2141472 | 73262.5 |
| hemolysin activation/secretion protein | SAMN05444679_106291 | Not Available | Positive | 2141469 - 2143139 | 59875.9 |
| filamentous hemagglutinin family n-terminal domain-containing protein | SAMN05444679_106292 | Not Available | Positive | 2143141 - 2146869 | 121934.0 |
| transcriptional regulator, lysr family | SAMN05444679_106293 | Not Available | Negative | 2146984 - 2147841 | 30556.3 |
| tautomerase enzyme | SAMN05444679_106294 | Not Available | Positive | 2147925 - 2148305 | 14183.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
