Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05444679_106275 | Not Available | Negative | 2123637 - 2124620 | 34477.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_106276 | Not Available | Negative | 2124643 - 2125512 | 30525.7 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_106277 | Not Available | Negative | 2125549 - 2126322 | 28253.7 |
| 2-methylcitrate dehydratase prpd | SAMN05444679_106278 | Not Available | Negative | 2126335 - 2127738 | 48333.5 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444679_106279 | Not Available | Negative | 2127735 - 2128643 | 33442.6 |
| polysaccharide deacetylase | SAMN05444679_106280 | Not Available | Negative | 2128640 - 2129518 | 33167.2 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_106281 | Not Available | Negative | 2129524 - 2130354 | 29364.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_106282 | Not Available | Negative | 2130388 - 2131161 | 28266.4 |
| amino acid abc transporter membrane protein, paat family | SAMN05444679_106283 | Not Available | Negative | 2131164 - 2132039 | 31735.8 |
| argininosuccinate lyase | SAMN05444679_106284 | Not Available | Negative | 2132033 - 2133472 | 52082.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
