Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component beta subunit | SAMN05444679_106265 | Not Available | Negative | 2111196 - 2112200 | 35422.6 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05444679_106266 | Not Available | Negative | 2112191 - 2113210 | 34986.6 |
| regulatory protein, fis family | SAMN05444679_106267 | Not Available | Negative | 2113308 - 2114495 | 42800.2 |
| quinohemoprotein ethanol dehydrogenase | SAMN05444679_106268 | Not Available | Positive | 2114625 - 2116730 | 75938.0 |
| d-xylose transport system substrate-binding protein | SAMN05444679_106269 | Not Available | Positive | 2116833 - 2117855 | 36023.3 |
| d-xylose transport system permease protein | SAMN05444679_106270 | Not Available | Positive | 2117860 - 2119047 | 41708.4 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444679_106271 | Not Available | Positive | 2119047 - 2119823 | 28009.0 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444679_106272 | Not Available | Positive | 2119885 - 2121048 | 40678.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_106273 | Not Available | Negative | 2121036 - 2122013 | 34276.7 |
| succinate semialdehyde dehydrogenase | SAMN05444679_106274 | Not Available | Positive | 2122175 - 2123635 | 51482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
