Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444679_101198 | Not Available | Positive | 177618 - 178469 | 31714.3 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_101199 | Not Available | Positive | 178482 - 179552 | 38519.5 |
| protein of unknown function | SAMN05444679_101200 | Not Available | Positive | 179619 - 180170 | 20623.4 |
| atp-dependent rna helicase rhle | SAMN05444679_101201 | Not Available | Negative | 180568 - 182343 | 62116.1 |
| predicted methyltransferase, contains tpr repeat | SAMN05444679_101202 | Not Available | Negative | 182522 - 183772 | 45736.7 |
| sulfate-transporting atpase | SAMN05444679_101203 | Not Available | Positive | 183986 - 185647 | 61373.2 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444679_101204 | Not Available | Positive | 185723 - 186976 | 43726.7 |
| nmt1-like family protein | SAMN05444679_101205 | Not Available | Negative | 186973 - 188385 | 52096.1 |
| l-aminopeptidase/d-esterase | SAMN05444679_101206 | Not Available | Negative | 188439 - 189458 | 34054.7 |
| co/zn/cd efflux system component | SAMN05444679_101207 | Not Available | Negative | 189451 - 190098 | 22370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
